ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j9uF2 - ECOD Domain | ECOD

ECOD/Domains/e3j9uF2

e3j9uF2

UID: 001554036

PDB

Range: F:29-100
PDB: 3J9U chain F(all domains)
UniProt: P16140 (all domains)
Gene: VMA2

Molecule: V-type proton ATPase subunit B (V-ATPase subunit B) (V-ATPase 57 kDa subunit) (Vacuolar proton pump subunit B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ATP-synt_ab_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyATP-synt_ab_N(1.1.7.17)

Pfam Families

PF02874ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 3J9U RCSB PDB: 3J9U PDBe: 3J9U UniProt: P16140

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure