ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4q8tA1 - ECOD Domain | ECOD

ECOD/Domains/e4q8tA1

e4q8tA1

UID: 001555894

PDB

Range: A:11-383
PDB: 4Q8T chain A(all domains)
UniProt: P28720 (all domains)
Gene: tgt

Molecule: Queuine tRNA-ribosyltransferase

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

6-amino-2-[(2-phenylethyl)amino]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one2YV
Chloride ionCL
Zinc ionZN

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4Q8T RCSB PDB: 4Q8T PDBe: 4Q8T UniProt: P28720

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.