ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qjyB2 - ECOD Domain | ECOD

ECOD/Domains/e4qjyB2

e4qjyB2

UID: 001558720

PDB

Range: B:6-396
PDB: 4QJY chain B(all domains)
UniProt: B3EYN9 (all domains)
Gene: araN

Molecule: GH127 beta-L-arabinofuranosidase

3D Structure

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Related Domains

Browse other domains in Beta-AFase-like_GH127_cat →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyBeta-AFase-like_GH127_cat(109.2.1.25)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07944Beta-AFase-like_GH127_cat

Beta-L-arabinofuranosidase, GH127 catalytic domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4QJY RCSB PDB: 4QJY PDBe: 4QJY UniProt: B3EYN9

Downloads

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