ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a20A1 - ECOD Domain | ECOD

ECOD/Domains/e5a20A1

e5a20A1

UID: 001560735

RepresentativePDB

Range: A:29-140,A:256-467
PDB: 5A20 chain A(all domains)
UniProt: P54309 (all domains)
Gene: 6

Molecule: Portal protein (Gene product 6) (gp6) (Portal vertex protein)

3D Structure

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Related Domains

Browse other domains in Phage_prot_Gp6 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAlpha-helical domain in upper collar protein(4038)

HH-groupAlpha-helical domain in upper collar protein(4038.1)

TT-groupAlpha-helical domain in upper collar protein(4038.1.1)

FFamilyPhage_prot_Gp6(4038.1.1.2)

Pfam Families

PF05133SPP1_portal

Phage portal protein, SPP1 Gp6-like

ClanCL0838Phage_portal

External Links

ECOD PDB View: 5A20 RCSB PDB: 5A20 PDBe: 5A20 UniProt: P54309

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