ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a21B1 - ECOD Domain | ECOD

ECOD/Domains/e5a21B1

e5a21B1

UID: 001563401

PDB

Range: B:141-255
PDB: 5A21 chain B(all domains)
UniProt: P54309 (all domains)
Gene: 6

Molecule: Portal protein (Gene product 6) (gp6) (Portal vertex protein)

3D Structure

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Related Domains

Browse other domains in Phage_prot_Gp6 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupBarrel domain in upper collar protein(4056)

HH-groupBarrel domain in upper collar protein(4056.1)

TT-groupBarrel domain in upper collar protein(4056.1.1)

FFamilyPhage_prot_Gp6(4056.1.1.1)

Pfam Families

PF05133SPP1_portal

Phage portal protein, SPP1 Gp6-like

ClanCL0838Phage_portal

External Links

ECOD PDB View: 5A21 RCSB PDB: 5A21 PDBe: 5A21 UniProt: P54309

Downloads

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