ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ajiF2 - ECOD Domain | ECOD

ECOD/Domains/e5ajiF2

e5ajiF2

UID: 001565004

PDB

Range: F:25-112
PDB: 5AJI chain F(all domains)
UniProt: P0C0S1 (all domains)
Gene: mscS

Molecule: Small-conductance mechanosensitive channel

3D Structure

Loading viewer...

Related Domains

Browse other domains in MS_channel_1st_1,MS_channel_1st →

Classification

AArchitecturealpha bundles(a.7)

XX-groupMechanosensitive channel protein MscS (YggB), transmembrane region(5058)

HH-groupMechanosensitive channel protein MscS (YggB), transmembrane region(5058.1)

TT-groupMechanosensitive channel protein MscS (YggB), transmembrane region(5058.1.1)

FFamilyMS_channel_1st_1,MS_channel_1st(5058.1.1.1)

Pfam Families

PF05552MS_channel_1st_1

Mechanosensitive ion channel, conserved TM helix

PF21088MS_channel_1st

Mechanosensitive ion channel, transmembrane helices 2/3

External Links

ECOD PDB View: 5AJI RCSB PDB: 5AJI PDBe: 5AJI UniProt: P0C0S1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure