ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5bthA1 - ECOD Domain | ECOD

ECOD/Domains/e5bthA1

e5bthA1

UID: 001565056

PDB

Range: A:1-391
PDB: 5BTH chain A(all domains)
UniProt: Q5AAT0 (all domains)
Gene: RAI1

Molecule: Decapping nuclease RAI1 (CaRai1) (EC 3.6.1.-) (NAD-capped RNA hydrolase RAI1) (DeNADding enzyme RAI1) (EC 3.6.1.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RAI1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRAI1(2008.1.1.27)

Pfam Families

RAI1 like PD-(D/E)XK nuclease

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5BTH RCSB PDB: 5BTH PDBe: 5BTH UniProt: Q5AAT0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure