ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qszA3 - ECOD Domain | ECOD

ECOD/Domains/e4qszA3

e4qszA3

UID: 001565132

PDB

Range: A:2-316
PDB: 4QSZ chain A(all domains)
UniProt: P0C872 (all domains)
Gene: Jmjd7

Molecule: Maltose-binding periplasmic protein, JmjC domain-containing protein 7 chimera

3D Structure

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Related Domains

Browse other domains in Cupin_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_8(10.12.1.52)

Ligands

in contact, ≤ 4 Å

alpha-D-glucopyranoseGLC
within 5 Å only

+ 1 additive (Citrate anion)

Citrate anionFLC
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13621Cupin_8

Cupin-like domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4QSZ RCSB PDB: 4QSZ PDBe: 4QSZ UniProt: P0C872

Downloads

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