ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ws2A1 - ECOD Domain | ECOD

ECOD/Domains/e4ws2A1

e4ws2A1

UID: 001566604

PDB

Range: A:1-227
PDB: 4WS2 chain A(all domains)
UniProt: P9WFQ9 (all domains)
Gene: ung

Molecule: Uracil-DNA glycosylase

3D Structure

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Related Domains

Browse other domains in UDG →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUracil-DNA glycosylase-like(7569)

HH-groupUracil-DNA glycosylase-like(7569.1)

TT-groupUracil-DNA glycosylase-like(7569.1.1)

FFamilyUDG(7569.1.1.1)

Ligands

in contact, ≤ 4 Å

6-aminopyrimidine-2,4(3H,5H)-dione6UA
Chloride ionCL

+ 3 additives (Citric acid, Dimethyl sulfoxide, Isopropyl alcohol)

Citric acidCIT

Pfam Families

Uracil DNA glycosylase superfamily

ClanCL0771UDG-like

External Links

ECOD PDB View: 4WS2 RCSB PDB: 4WS2 PDBe: 4WS2 UniProt: P9WFQ9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04272

Dimethyl sulfoxideDMS

DrugBank DB01093

Isopropyl alcoholIPA

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.