ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y6nA1 - ECOD Domain | ECOD

ECOD/Domains/e4y6nA1

e4y6nA1

UID: 001566801

PDB

Range: A:19-322
PDB: 4Y6N chain A(all domains)
UniProt: P9WMW9 (all domains)
Gene: gpgS

Molecule: Glucosyl-3-phosphoglycerate synthase

3D Structure

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Related Domains

Browse other domains in Glycos_transf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2(7516.1.1.2)

Ligands

in contact, ≤ 4 Å

3-phospho-D-glyceric acid3PG
drugDrugBank DB04510
Uridine diphosphate glucoseUPG
drugDrugBank DB01861

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

External Links

ECOD PDB View: 4Y6N RCSB PDB: 4Y6N PDBe: 4Y6N UniProt: P9WMW9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

MANGANESE (II) ION

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.