ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tkpB1 - ECOD Domain | ECOD

ECOD/Domains/e4tkpB1

e4tkpB1

UID: 001567585

PDB

Range: B:5-82
PDB: 4TKP chain B(all domains)
UniProt: Q0PF16 (all domains)
Gene: TRIM5

Molecule: Tripartite motif-containing protein 5 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TRIM5) (TRIM5alpha)

3D Structure

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Related Domains

Browse other domains in zf-RING_UBOX →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-RING_UBOX(376.1.1.20)

Pfam Families

PF13445zf-RING_UBOX

RING-type zinc-finger

ClanCL0229RING

External Links

ECOD PDB View: 4TKP RCSB PDB: 4TKP PDBe: 4TKP UniProt: Q0PF16

Downloads

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