ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x6rB2 - ECOD Domain | ECOD

ECOD/Domains/e4x6rB2

e4x6rB2

UID: 001567772

PDB

Range: B:90-244
PDB: 4X6R chain B(all domains)
UniProt: P00514 (all domains)
Gene: PRKAR1A

Molecule: cAMP-dependent protein kinase type I-alpha regulatory subunit

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Tris(Hydroxyethyl)AminomethaneTAM
drugDrugBank DB04237

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4X6R RCSB PDB: 4X6R PDBe: 4X6R UniProt: P00514

Downloads

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Magnesium ion

metalwithin 5 Å only

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.