ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a5rA1 - ECOD Domain | ECOD

ECOD/Domains/e5a5rA1

e5a5rA1

UID: 001568045

PDB

Range: A:979-1108
PDB: 5A5R chain A(all domains)
UniProt: Q6PL18 (all domains)
Gene: ATAD2

Molecule: ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

5-(5-methoxypyridin-3-yl)-3-methyl-8-[(piperidin-4-yl)amino]-1,2-dihydro-1,7-naphthyridin-2-oneNP8

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5A5R RCSB PDB: 5A5R PDBe: 5A5R UniProt: Q6PL18

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.