ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4u3fD1 - ECOD Domain | ECOD

ECOD/Domains/e4u3fD1

e4u3fD1

UID: 001568878

PDB

Range: D:196-241
PDB: 4U3F chain D(all domains)
UniProt: D0VX26 (all domains)

Molecule: Mitochondrial cytochrome c1, heme protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitectureextended segments(a.20)

XX-groupcytochrome c1 transmembrane anchor(5013)

HH-groupcytochrome c1 transmembrane anchor(5013.1)

TT-groupcytochrome c1 transmembrane anchor(5013.1.1)

FFamilyCytochrom_C1(5013.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
PhosphatidylethanolaminePEE
drugDrugBank DB04327

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 4U3F RCSB PDB: 4U3F PDBe: 4U3F UniProt: D0VX26

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.