ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bmxD1 - ECOD Domain | ECOD

ECOD/Domains/e5bmxD1

e5bmxD1

UID: 001569169

PDB

Range: D:3-248
PDB: 5BMX chain D(all domains)
UniProt: Q07412 (all domains)
Gene: TPI

Molecule: Triosephosphate isomerase

3D Structure

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Related Domains

Browse other domains in TIM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTIM(2002.1.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Pfam Families

Triosephosphate isomerase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5BMX RCSB PDB: 5BMX PDBe: 5BMX UniProt: Q07412

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.