ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yj4A1 - ECOD Domain | ECOD

ECOD/Domains/e1yj4A1

e1yj4A1

UID: 000157139

PDB

Range: A:1-354
PDB: 1YJ4 chain A(all domains)
UniProt: P13513 (all domains)
Gene: TRI5

Molecule: Trichodiene synthase

3D Structure

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Related Domains

Browse other domains in TRI5 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTRI5(141.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Trichodiene synthase (TRI5)

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 1YJ4 RCSB PDB: 1YJ4 PDBe: 1YJ4 UniProt: P13513

Downloads

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