ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dqmA1 - ECOD Domain | ECOD

ECOD/Domains/e2dqmA1

e2dqmA1

UID: 001581404

PDB

Range: A:194-443
PDB: 2DQM chain A(all domains)
UniProt: P04825 (all domains)
Gene: pepN

Molecule: Aminopeptidase N

3D Structure

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Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

UbenimexBES
drugDrugBank DB03424
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 2DQM RCSB PDB: 2DQM PDBe: 2DQM UniProt: P04825

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.