ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nmfB3 - ECOD Domain | ECOD

ECOD/Domains/e4nmfB3

e4nmfB3

UID: 001610647

PDB

Range: B:120-460
PDB: 4NMF chain B(all domains)
UniProt: Q746X3 (all domains)
Gene: putA

Molecule: Proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Pro_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPro_dh(2002.1.1.67)

Ligands

in contact, ≤ 4 Å

(2R)-2-methyl-1,4-dioxo-1,2,3,4-tetrahydronaphthalene-2-sulfonic acid2L3
(2S)-2-methyl-1,4-dioxo-1,2,3,4-tetrahydronaphthalene-2-sulfonic acid2LB
N-propargylglycine-modified flavin adenine dinucleotideP5F

Pfam Families

Proline dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4NMF RCSB PDB: 4NMF PDBe: 4NMF UniProt: Q746X3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.