ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dpkA1 - ECOD Domain | ECOD

ECOD/Domains/e2dpkA1

e2dpkA1

UID: 000001616

RepresentativePDB

Range: A:370-502
PDB: 2DPK chain A(all domains)
UniProt: P23685 (all domains)
Gene: SLC8A1

Molecule: Sodium/calcium exchanger 1

3D Structure

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Related Domains

Browse other domains in Calx-beta →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCalx-beta(11.1.1.50)

Ligands

in contact, ≤ 4 Å

GuanidineGAI
drugDrugBank DB00536
Calcium ionCA
metal

+ 1 additive (HEPES)

Pfam Families

PF03160Calx-beta

Calx-beta domain

ClanCL0159E-set

External Links

ECOD PDB View: 2DPK RCSB PDB: 2DPK PDBe: 2DPK UniProt: P23685

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPES

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.