ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4odbC1 - ECOD Domain | ECOD

ECOD/Domains/e4odbC1

e4odbC1

UID: 001616450

PDB

Range: C:330-469
PDB: 4ODB chain C(all domains)
UniProt: P04506 (all domains)
Gene: S1

Molecule: Outer capsid protein sigma-1 (Sigma1) (Cell attachment protein) (Hemagglutinin)

3D Structure

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Related Domains

Browse other domains in Reo_sigma1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupDomain in virus attachment proteins(5092)

HH-groupDomain in virus attachment proteins(5092.1)

TT-groupDomain in virus attachment proteins(5092.1.1)

FFamilyReo_sigma1(5092.1.1.2)

Pfam Families

PF01664Reo_sigma1

Reovirus viral attachment protein sigma 1

ClanCL0326Reo_sigma

External Links

ECOD PDB View: 4ODB RCSB PDB: 4ODB PDBe: 4ODB UniProt: P04506

Downloads

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