ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2obdA2 - ECOD Domain | ECOD

ECOD/Domains/e2obdA2

e2obdA2

UID: 000163195

PDB

Range: A:222-476
PDB: 2OBD chain A(all domains)
UniProt: P11597 (all domains)
Gene: CETP

Molecule: Cholesteryl ester transfer protein

3D Structure

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Related Domains

Browse other domains in LBP_BPI_CETP_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupAha1/BPI domain-like(883)

HH-groupAha1/BPI domain-like(883.1)

TT-groupAha1/BPI domain-like(883.1.1)

FFamilyLBP_BPI_CETP_C(883.1.1.2)

Ligands

in contact, ≤ 4 Å

(Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-OxidePCW
drugDrugBank DB03690
Cholesteryl oleate2OB

+ 1 additive (Tetraethylene glycol)

Pfam Families

PF02886LBP_BPI_CETP_C

LBP / BPI / CETP family, C-terminal domain

ClanCL0648Aha1_BPI

External Links

ECOD PDB View: 2OBD RCSB PDB: 2OBD PDBe: 2OBD UniProt: P11597

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.