ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ongA1 - ECOD Domain | ECOD

ECOD/Domains/e2ongA1

e2ongA1

UID: 000163593

PDB

Range: A:258-577
PDB: 2ONG chain A(all domains)
UniProt: Q40322 (all domains)

Molecule: 4S-limonene synthase

3D Structure

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Related Domains

Browse other domains in Terpene_synth_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_synth_C(141.1.1.4)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
(1S)-1-[(1R)-1-FLUOROETHYL]-1,5-DIMETHYLHEXYL TRIHYDROGEN DIPHOSPHATEFPG
within 5 Å only

+ 1 additive (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

Pfam Families

PF03936Terpene_synth_C

Terpene synthase family, metal binding domain

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 2ONG RCSB PDB: 2ONG PDBe: 2ONG UniProt: Q40322

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer. Drug annotations from DrugDomain.