ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j8aA1 - ECOD Domain | ECOD

ECOD/Domains/e2j8aA1

e2j8aA1

UID: 000163798

RepresentativePDB

Range: A:247-366
PDB: 2J8A chain A(all domains)
UniProt: P38827 (all domains)
Gene: SET1

Molecule: Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.354) (COMPASS component SET1) (Lysine N-methyltransferase 2) (SET domain-containing protein 1)

3D Structure

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Related Domains

Browse other domains in SET1_RBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilySET1_RBD(304.9.1.34)

Pfam Families

PF21569SET1_RBD

Histone-lysine N-methyltransferase, RNA-binding domain

ClanCL0221RRM

External Links

ECOD PDB View: 2J8A RCSB PDB: 2J8A PDBe: 2J8A UniProt: P38827

Downloads

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