ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3zedB3 - ECOD Domain | ECOD

ECOD/Domains/e3zedB3

e3zedB3

UID: 001652679

PDB

Range: B:523-695
PDB: 3ZED chain B(all domains)
UniProt: P22173 (all domains)
Gene: VP1

Molecule: RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Birna_VP1_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyBirna_VP1_thumb(4967.1.1.15)

Pfam Families

PF20488Birna_VP1_thumb

Birnavirus RNA dependent RNA polymerase (VP1), thumb domain

ClanCL0027RdRP

External Links

ECOD PDB View: 3ZED RCSB PDB: 3ZED PDBe: 3ZED UniProt: P22173

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure