ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u5zO3 - ECOD Domain | ECOD

ECOD/Domains/e3u5zO3

e3u5zO3

UID: 001671493

PDB

Range: O:2-159
PDB: 3U5Z chain O(all domains)
UniProt: P04526 (all domains)
Gene: 44

Molecule: DNA polymerase accessory protein 44

3D Structure

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Related Domains

Browse other domains in AAA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA(2004.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium08T
Magnesium ion

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3U5Z RCSB PDB: 3U5Z PDBe: 3U5Z UniProt: P04526

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.