ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zhcC1 - ECOD Domain | ECOD

ECOD/Domains/e4zhcC1

e4zhcC1

UID: 001674535

PDB

Range: C:4-177
PDB: 4ZHC chain C(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: Neutrophil gelatinase-associated lipocalin

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

N-{2-[bis(2-{[(2,3-dihydroxyphenyl)carbonyl]amino}ethyl)amino]ethyl}-1-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxamideTC2
Thorium ionTH
metalwithin 5 Å only

+ 2 additives (Acetate, Sulfate ion)

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 4ZHC RCSB PDB: 4ZHC PDBe: 4ZHC UniProt: P80188

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Acetate

DrugBank DB14511

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.