ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jb1B2 - ECOD Domain | ECOD

ECOD/Domains/e3jb1B2

e3jb1B2

UID: 001678004

PDB

Range: B:828-959
PDB: 3JB1 chain B(all domains)
UniProt: Q6TS43 (all domains)

Molecule: Inner capsid protein VP1

3D Structure

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Related Domains

Browse other domains in VP1_protrusion →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672)

HH-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672.1)

TT-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672.1.1)

FFamilyVP1_protrusion(3672.1.1.1)

Pfam Families

PF20855VP1_protrusion

CPV Capsid shell protein VP1, small protrusion domain

External Links

ECOD PDB View: 3JB1 RCSB PDB: 3JB1 PDBe: 3JB1 UniProt: Q6TS43

Downloads

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