ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jb3C2 - ECOD Domain | ECOD

ECOD/Domains/e3jb3C2

e3jb3C2

UID: 001678026

PDB

Range: C:828-959
PDB: 3JB3 chain C(all domains)
UniProt: Q6TS43 (all domains)

Molecule: Inner capsid protein VP1

3D Structure

Loading viewer...

Related Domains

Browse other domains in VP1_protrusion →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672)

HH-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672.1)

TT-groupSmall protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein(3672.1.1)

FFamilyVP1_protrusion(3672.1.1.1)

Pfam Families

PF20855VP1_protrusion

CPV Capsid shell protein VP1, small protrusion domain

External Links

ECOD PDB View: 3JB3 RCSB PDB: 3JB3 PDBe: 3JB3 UniProt: Q6TS43

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure