ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cd6C2 - ECOD Domain | ECOD

ECOD/Domains/e5cd6C2

e5cd6C2

UID: 001679627

PDB

Range: C:371-600
PDB: 5CD6 chain C(all domains)
UniProt: A6LCM3 (all domains)
Gene: BDI_1685

Molecule: TPR-domain containing protein

3D Structure

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Related Domains

Browse other domains in BDI_1685-like_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyBDI_1685-like_C(109.4.1.286)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22256BDI_1685-like_C

BDI_1685-like, C-terminal domain

ClanCL0020TPR

External Links

ECOD PDB View: 5CD6 RCSB PDB: 5CD6 PDBe: 5CD6 UniProt: A6LCM3

Downloads

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