ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bqmA1 - ECOD Domain | ECOD

ECOD/Domains/e5bqmA1

e5bqmA1

UID: 001680404

PDB

Range: A:2-437
PDB: 5BQM chain A(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D

3D Structure

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Related Domains

Browse other domains in Peptidase_M27 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M27(2498.1.1.15)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01742Peptidase_M27

Clostridial neurotoxin zinc protease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 5BQM RCSB PDB: 5BQM PDBe: 5BQM UniProt: P19321

Downloads

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