ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5bqmD1 - ECOD Domain | ECOD

ECOD/Domains/e5bqmD1

e5bqmD1

UID: 001680407

PDB

Range: D:516-911
PDB: 5BQM chain D(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D (BoNT/D) (Bontoxilysin-D) [Cleaved into: Botulinum neurotoxin D light chain (LC) (EC 3.4.24.69); Botulinum neurotoxin D heavy chain (HC)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Toxin_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupBotulinum neurotoxin A heavy chain(4950)

HH-groupBotulinum neurotoxin A heavy chain(4950.1)

TT-groupBotulinum neurotoxin A heavy chain(4950.1.1)

FFamilyToxin_trans(4950.1.1.1)

Pfam Families

PF07952Toxin_trans

Clostridium neurotoxin, Translocation domain

ClanCL0935Toxin_transloc

External Links

ECOD PDB View: 5BQM RCSB PDB: 5BQM PDBe: 5BQM UniProt: P19321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure