ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c78B2 - ECOD Domain | ECOD

ECOD/Domains/e5c78B2

e5c78B2

UID: 001680443

PDB

Range: B:338-564
PDB: 5C78 chain B(all domains)
UniProt: O86150 (all domains)
Gene: wlaB

Molecule: ABC-type lipopolysaccharide transporter PglK (WlaB protein)

3D Structure

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Related Domains

Browse other domains in ABC_tran, ABC_ATPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran, ABC_ATPase(2004.1.1.435)

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

PF09818ABC_ATPase

P-loop domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5C78 RCSB PDB: 5C78 PDBe: 5C78 UniProt: O86150

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