ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cd4H1 - ECOD Domain | ECOD

ECOD/Domains/e5cd4H1

e5cd4H1

UID: 001681347

PDB

Range: H:1-219
PDB: 5CD4 chain H(all domains)
UniProt: Q46898 (all domains)
Gene: casD

Molecule: CRISPR system Cascade subunit CasD

3D Structure

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Related Domains

Browse other domains in Cas_Cas5d →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR system Cas5 homologs(304.158)

TT-groupCRISPR system Cas5 homologs(304.158.1)

FFamilyCas_Cas5d(304.158.1.2)

Pfam Families

PF09704Cas_Cas5d

CRISPR-associated protein (Cas_Cas5)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 5CD4 RCSB PDB: 5CD4 PDBe: 5CD4 UniProt: Q46898

Downloads

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