ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cfmB1 - ECOD Domain | ECOD

ECOD/Domains/e5cfmB1

e5cfmB1

UID: 001681366

PDB

Range: B:191-377
PDB: 5CFM chain B(all domains)
UniProt: A7SLZ2 (all domains)
Gene: v1g246111

Molecule: Stimulator of Interferon Genes

3D Structure

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Related Domains

Browse other domains in TMEM173 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSTING C-terminal domain(3398)

HH-groupSTING C-terminal domain(3398.1)

TT-groupSTING C-terminal domain(3398.1.1)

FFamilyTMEM173(3398.1.1.1)

Ligands

in contact, ≤ 4 Å

2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one4BW

+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer.

Pfam Families

PF15009STING_LBD

STING ligand-binding domain

ClanCL0709STING

External Links

ECOD PDB View: 5CFM RCSB PDB: 5CFM PDBe: 5CFM UniProt: A7SLZ2

Downloads

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Drug annotations from DrugDomain.