ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c2uA1 - ECOD Domain | ECOD

ECOD/Domains/e5c2uA1

e5c2uA1

UID: 001681454

RepresentativePDB

Range: A:214-329
PDB: 5C2U chain A(all domains)
UniProt: K9ZTJ6 (all domains)
Gene: nup54.S

Molecule: 54 kDa nucleoporin

3D Structure

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Related Domains

Browse other domains in Nup54_a-b →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNup54 ferredoxin-like domain(304.166)

TT-groupNup54 ferredoxin-like domain(304.166.1)

FFamilyNup54_a-b(304.166.1.9)

Pfam Families

PF29949Nup54_a-b

Nup54 alpha/beta domain

ClanCL0960HD_NOTCH-like

External Links

ECOD PDB View: 5C2U RCSB PDB: 5C2U PDBe: 5C2U UniProt: K9ZTJ6

Downloads

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