ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dkiB1 - ECOD Domain | ECOD

ECOD/Domains/e1dkiB1

e1dkiB1

UID: 001682346

PDB

Range: B:5P-12P,B:38P-107P
PDB: 1DKI chain B(all domains)
UniProt: P0C0J0 (all domains)
Gene: speB

Molecule: PYROGENIC EXOTOXIN B ZYMOGEN

3D Structure

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Related Domains

Browse other domains in Inhibitor_I69 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPeptidase inhibitors family I69(3999)

HH-groupPeptidase inhibitors family I69(3999.1)

TT-groupPeptidase inhibitors family I69(3999.1.1)

FFamilyInhibitor_I69(3999.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13734Inhibitor_I69

Spi protease inhibitor

External Links

ECOD PDB View: 1DKI RCSB PDB: 1DKI PDBe: 1DKI UniProt: P0C0J0

Downloads

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