ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ofdA5 - ECOD Domain | ECOD

ECOD/Domains/e1ofdA5

e1ofdA5

UID: 001684815

RepresentativePDB

Range: A:794-1239
PDB: 1OFD chain A(all domains)
UniProt: P55038 (all domains)
Gene: gltS

Molecule: FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2

3D Structure

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Related Domains

Browse other domains in Glu_synthase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlu_synthase(2002.1.1.70)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
Flavin mononucleotideFMN
drugDrugBank DB03247
FE3-S4 CLUSTER

Pfam Families

PF01645Glu_synthase

Conserved region in glutamate synthase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1OFD RCSB PDB: 1OFD PDBe: 1OFD UniProt: P55038

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.