ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cq9A1 - ECOD Domain | ECOD

ECOD/Domains/e5cq9A1

e5cq9A1

UID: 001684841

RepresentativePDB

Range: A:36-133
PDB: 5CQ9 chain A(all domains)
UniProt: Q8ZQC8 (all domains)
Gene: sopD2

Molecule: Secreted effector protein sopD2 (Salmonella outer protein D 2)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupType III secretory system chaperone-like(241)

HH-groupN-terminal domain of secreted effector protein sifA(241.13)

TT-groupN-terminal domain of secreted effector protein sifA(241.13.1)

FFamilySopD(241.13.1.2)

Pfam Families

Salmonella outer protein D

External Links

ECOD PDB View: 5CQ9 RCSB PDB: 5CQ9 PDBe: 5CQ9 UniProt: Q8ZQC8

Downloads

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