ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wefB1 - ECOD Domain | ECOD

ECOD/Domains/e4wefB1

e4wefB1

UID: 001684909

PDB

Range: B:142-572
PDB: 4WEF chain B(all domains)
UniProt: Q6WJ03 (all domains)
Gene: HN

Molecule: Hemagglutinin-neuraminidase glycoprotein

3D Structure

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Related Domains

Browse other domains in HN →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyHN(5.1.3.5)

Ligands

in contact, ≤ 4 Å

5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acidFSI
drugDrugBank DB04211
N-AcetylglucosamineNAG
drug

Pfam Families

Haemagglutinin-neuraminidase

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4WEF RCSB PDB: 4WEF PDBe: 4WEF UniProt: Q6WJ03

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB00141

Calcium ionCA

metal

(3R,4R,5R,6R)-5-(acetylamino)-3-fluoro-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]-3,4,5,6-tetrahydropyranium-2-carboxylateDF4

(2R,3R,4R,5R,6R)-5-acetamido-2,3-difluoro-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]tetrahydro-2H-pyran-2-carboxylicacidSFJ

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.