ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1fdiA3 - ECOD Domain | ECOD

ECOD/Domains/e1fdiA3

e1fdiA3

UID: 001685625

PDB

Range: A:58-139,A:335-564
PDB: 1FDI chain A(all domains)
UniProt: P07658 (all domains)
Gene: fdhF

Molecule: FORMATE DEHYDROGENASE H

3D Structure

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Related Domains

Browse other domains in Molybdopterin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin(2003.2.1.1)

Ligands

in contact, ≤ 4 Å

NitriteNO2
drugDrugBank DB12529
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
MOLYBDENUM(VI) ION

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

External Links

ECOD PDB View: 1FDI RCSB PDB: 1FDI PDBe: 1FDI UniProt: P07658

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.