ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cpcB2 - ECOD Domain | ECOD

ECOD/Domains/e5cpcB2

e5cpcB2

UID: 001687097

PDB

Range: B:30-133
PDB: 5CPC chain B(all domains)
UniProt: P40722 (all domains)
Gene: sopD

Molecule: Secreted effector protein SopD (Salmonella outer protein D)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupType III secretory system chaperone-like(241)

HH-groupN-terminal domain of secreted effector protein sifA(241.13)

TT-groupN-terminal domain of secreted effector protein sifA(241.13.1)

FFamilySopD(241.13.1.2)

Pfam Families

Salmonella outer protein D

External Links

ECOD PDB View: 5CPC RCSB PDB: 5CPC PDBe: 5CPC UniProt: P40722

Downloads

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