ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ap0A1 - ECOD Domain | ECOD

ECOD/Domains/e5ap0A1

e5ap0A1

UID: 001687962

PDB

Range: A:519-795
PDB: 5AP0 chain A(all domains)
UniProt: P33981 (all domains)
Gene: TTK

Molecule: DUAL SPECIFICITY PROTEIN KINASE TTK

3D Structure

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Related Domains

Browse other domains in Pkinase, Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Kdo(206.1.1.71)

Ligands

in contact, ≤ 4 Å

9-CYCLOPENTYL-2-[[2-METHOXY-4-[(1-METHYLPIPERIDIN-4-YL)OXY]-PHENYL]AMINO]-7-METHYL-7,9-DIHYDRO-8H-PURIN-8-ONEAU5
O-acetaldehydyl-hexaethylene glycolP4C

+ 2 additives (Dimethyl sulfoxide, 1,2-ETHANEDIOL)

Dimethyl sulfoxideDMS

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 5AP0 RCSB PDB: 5AP0 PDBe: 5AP0 UniProt: P33981

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.