ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d8aB1 - ECOD Domain | ECOD

ECOD/Domains/e5d8aB1

e5d8aB1

UID: 001688097

PDB

Range: B:12-218
PDB: 5D8A chain B(all domains)
UniProt: Q6PN23 (all domains)

Molecule: Genome polyprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5D8A RCSB PDB: 5D8A PDBe: 5D8A UniProt: Q6PN23

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure