ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a9qC1 - ECOD Domain | ECOD

ECOD/Domains/e5a9qC1

e5a9qC1

UID: 001688718

PDB

Range: C:518-575,C:596-746,C:775-1156
PDB: 5A9Q chain C(all domains)
UniProt: Q8WUM0 (all domains)
Gene: NUP133

Molecule: Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)

3D Structure

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Related Domains

Browse other domains in Nucleoporin_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyNucleoporin_C(109.26.1.1)

Pfam Families

PF03177Nucleoporin_C

Non-repetitive/WGA-negative nucleoporin C-terminal

ClanCL0020TPR

External Links

ECOD PDB View: 5A9Q RCSB PDB: 5A9Q PDBe: 5A9Q UniProt: Q8WUM0

Downloads

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