ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5a6uA1 - ECOD Domain | ECOD

ECOD/Domains/e5a6uA1

e5a6uA1

UID: 001692228

PDB

Range: A:26-214,A:237-312,A:337-467
PDB: 5A6U chain A(all domains)
UniProt: P38377 (all domains)
Gene: SEC61A1

Molecule: Protein transport protein Sec61 subunit alpha isoform 1 (Sec61 alpha-1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SecY,Plug_translocon →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPreprotein translocase SecY subunit(5061)

HH-groupPreprotein translocase SecY subunit(5061.1)

TT-groupPreprotein translocase SecY subunit(5061.1.1)

FFamilySecY,Plug_translocon(5061.1.1.2)

Pfam Families

SecY

ClanCL0376Oxa1

PF10559Plug_translocon

Plug domain of Sec61p

External Links

ECOD PDB View: 5A6U RCSB PDB: 5A6U PDBe: 5A6U UniProt: P38377

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure