ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dkdA1 - ECOD Domain | ECOD

ECOD/Domains/e5dkdA1

e5dkdA1

UID: 001694184

PDB

Range: A:1457-1566
PDB: 5DKD chain A(all domains)
UniProt: P51532 (all domains)
Gene: SMARCA4

Molecule: Transcription activator BRG1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

(2E)-1-(2-hydroxyphenyl)-3-[(1R,4R)-5-(pyridin-2-yl)-2,5-diazabicyclo[2.2.1]hept-2-yl]prop-2-en-1-one5BW
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5DKD RCSB PDB: 5DKD PDBe: 5DKD UniProt: P51532

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.