ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pfaB1 - ECOD Domain | ECOD

ECOD/Domains/e4pfaB1

e4pfaB1

UID: 001694952

PDB

Range: B:8-194
PDB: 4PFA chain B(all domains)
UniProt: P9WJF1 (all domains)
Gene: dprE1

Molecule: Probable decaprenylphosphoryl-beta-D-ribose oxidase

3D Structure

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Related Domains

Browse other domains in FAD_binding_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupFAD-binding domain-like(217)

HH-groupFAD-binding domain(217.1)

TT-groupFAD-binding domain(217.1.1)

FFamilyFAD_binding_4(217.1.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
7-(hydroxyamino)-N-(pyridin-3-ylmethyl)-5-(trifluoromethyl)-1,3-benzothiazole-2-carboxamide 3-oxideN77

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01565FAD_binding_4

FAD binding domain

ClanCL0077FAD_PCMH

External Links

ECOD PDB View: 4PFA RCSB PDB: 4PFA PDBe: 4PFA UniProt: P9WJF1

Downloads

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