ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4ypbYF1 - ECOD Domain | ECOD

ECOD/Domains/e4ypbYF1

e4ypbYF1

UID: 001695709

PDB

Range: YF:1-208
PDB: 4YPB chain YF(all domains)
UniProt: Q5SHN9 (all domains)
Gene: rplD

Molecule: Large ribosomal subunit protein uL4 (50S ribosomal protein L4) (L1e)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L4(7559)

HH-groupRibosomal protein L4(7559.1)

TT-groupRibosomal protein L4(7559.1.1)

FFamilyRibosomal_L4(7559.1.1.1)

Pfam Families

PF00573Ribosomal_L4

Ribosomal protein L4/L1 family

External Links

ECOD PDB View: 4YPB RCSB PDB: 4YPB PDBe: 4YPB UniProt: Q5SHN9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure