ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gh8B1 - ECOD Domain | ECOD

ECOD/Domains/e2gh8B1

e2gh8B1

UID: 001696066

PDB

Range: B:360-419,B:590-703
PDB: 2GH8 chain B(all domains)
UniProt: P36285 (all domains)
Gene: ORF2

Molecule: Capsid protein VP1 (CP) (Capsid protein) (Coat protein) [Cleaved into: Capsid leader protein (LC); Mature capsid protein]

3D Structure

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Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat(1.2.1.1)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 2GH8 RCSB PDB: 2GH8 PDBe: 2GH8 UniProt: P36285

Downloads

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