ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gh8C1 - ECOD Domain | ECOD

ECOD/Domains/e2gh8C1

e2gh8C1

UID: 001696069

PDB

Range: C:160-359
PDB: 2GH8 chain C(all domains)
UniProt: P36285 (all domains)
Gene: ORF2

Molecule: Capsid protein VP1 (CP) (Capsid protein) (Coat protein) [Cleaved into: Capsid leader protein (LC); Mature capsid protein]

3D Structure

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Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat(10.2.1.13)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 2GH8 RCSB PDB: 2GH8 PDBe: 2GH8 UniProt: P36285

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